BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028A11SP1|AL428836
(595 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1655 1143 0.0
>3x_Contig1655
Length = 16228
Score = 1143 bits (574), Expect = 0.0
Identities = 589/594 (99%), Gaps = 1/594 (0%)
Strand = Plus / Plus
Query: 2 ctaaagtatgatgaacgcactcaaaaaaaaaaaaagcaggtcacatgactacatcacgtg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8970 ctaaagtatgatgaacgcactcaaaaaaaaaaaaagcaggtcacatgactacatcacgtg 9029
Query: 62 acctttatctttcccgtttctttaaagggtttagcttctagacaggttccatcaaacgta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9030 acctttatctttcccgtttctttaaagggtttagcttctagacaggttccatcaaacgta 9089
Query: 122 tttatatacacatttatgtacatcccgcaacktttgcagagaaaatgtcaaacagatcaa 181
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 9090 tttatatacacatttatgtacatcccgcaacgtttgcagagaaaatgtcaaacagatcaa 9149
Query: 182 cgaaacaccctcagatacaggagaagcgattggatgaccaaatagtggatctgatactta 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9150 cgaaacaccctcagatacaggagaagcgattggatgaccaaatagtggatctgatactta 9209
Query: 242 aataactcttctgtttttggtctgagattgtgaattttggcgcaaaagaccggggatgag 301
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 9210 aataactcttctgtttttggtctgagattgtgaattttggcgcaacagaccggggatgag 9269
Query: 302 gtttagatcccgacatcaagtggataaaccgaacgttatagtgacacaaagcaatagaaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9270 gtttagatcccgacatcaagtggataaaccgaacgttatagtgacacaaagcaatagaaa 9329
Query: 362 aaatgaggatcgattgggtgaagatgcttccctgaaagctgctcaggcaatgttcaagaa 421
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9330 gaatgaggatcgattgggtgaagatgcttccctgaaagctgctcaggcaatgttcaagaa 9389
Query: 422 acatactgtkagccaagggtttgcagtatcggatgcaccagggacaaaactatctttacc 481
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9390 acatactgtgagccaagggtttgcagtatcggatgcaccagggacaaaactatctttacc 9449
Query: 482 caattcagggcatggtacgccggcacataacgtccaggctatggcaaggtcctcttcttc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9450 caattcagggcatggtacgccggcacataacgtccaggctatggcaaggtcctcttcttc 9509
Query: 542 atcctctgcaacttctactccgataaacmattattagaagaagtccgagatcta 595
|||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 9510 atcctctgcaacttctactccgataaac-attattagaagaagtccgagatcta 9562
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,304
Number of Sequences: 1807
Number of extensions: 11304
Number of successful extensions: 499
Number of sequences better than 1.0e-20: 1
length of query: 595
length of database: 10,358,551
effective HSP length: 16
effective length of query: 579
effective length of database: 10,329,639
effective search space: 5980860981
effective search space used: 5980860981
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)